YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|206710112, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLWQSDLRV SWRAQWISLL IHGLVAAVIL LMPWPLSYTP LWMILLSLVV FDCVRSQRRI  60
   61 NTCQGEIKLL MDGRLRWQGQ DWTLLRPPWL LKSGMVLRLR AESGRHQHLW LAADSMEEAE 120
  121 WRELRRILLQ QPISGQH

Type	Start	End	Confidence
Cytoplasmic	1	11	0.90
Transmembrane Helix	12	34	0.83
Non-Cytoplasmic	35	37	0.55
Transmembrane Helix	38	55	0.59
Cytoplasmic	56	137	0.67