YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169257217
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTHALHLA TPGMARICLY GDLQRFCRRV SLQVASGAEA VRALAVQLPG LRQKLNDGWY  60
   61 QVRIAGDDVT ADTLTTSLHD PLPPGAVIHI VPRLGGAKSG GVFQAVLGAA LIAVAWWNPA 120
  121 GWLGAAAVSG MYMTGASMVL GGVAQMLAPK PKMSEMRQTD NGRQNTYFSS LDNMVANGNT 180
  181 LPVLYGEMQV GSRVISQEVS TADEGDGGQV VVIGR

Type	Start	End	Confidence
Cytoplasmic	1	99	0.97
Transmembrane Helix	100	117	0.95
Non-Cytoplasmic	118	124	0.72
Transmembrane Helix	125	148	0.89
Cytoplasmic	149	215	0.99