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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16421103, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQPVVRIGE WLVTPSVNQI SRQGRQITLE PRLIDLLMYF AHHPDEVLSR DNIIDHVWMR  60
   61 TIVTNHVVTQ SISELRKSLR DGGDSNAEYI VTVPKRGYKL TAPVIWCEEN SDEIDNSSTS 120
  121 PPPPIAATNA EPTEGVTAAT PVPPASLQTP TKKAKKPRIA AFWTWVMFLL SLATLVVFIV 180
  181 MSVVDHNAAV TKTRLLLNPR DIDVRFEGGN SCNNWVSQES YAIGLGGLIT DLLNTYSTFM 240
  241 VHDKTNYRVN EPSSSGKTLT IQFVNQRHYR AQQCFMSVVL IDNADGSTML DKRYFVTNTN 300
  301 QLSIQDDLFN SLSFVLTQPW PNRMREQLAL FRTPQNTALM RFYEARQLIL SGDAQALGKA 360
  361 SDILNGIIKE TPDFNYAYEY KVLVDVLRQS QQPFDKEQVA ALNEEFKKID QIPGVEKTSV 420
  421 YYKIKTVDLL GKGDIDAAYE EINKSIELEM SWFNYVLLGK VYEMKGENRL AADAYLTAFN 480
  481 LRPGENTLYW IENGVFQTSV QKIVPYLNSF LAED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle