YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|167993072, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTAIALLA WFVSSASLAA TPWQKITHPV PGAAQSIGSF ANGCIIGADT LPVQSDNYQV  60
   61 MRTDQRRYFG HPDLVMFIQR LSHQAQQRGL GTVLIGDMGM PAGGRFNGGH ASHQTGLDVD 120
  121 IFLQLPKTRW SQAQLLRPQA LDLVSRDGKH VVPSRWSSDI ASLIKLAAQD NDVTRIFVNP 180
  181 AIKQQLCLDA GNDRDWLRKV RPWFQHRAHM HVRLRCPADS LECEDQPLPP PGDGCGAELQ 240
  241 SWFEPPKPGT TKPEKKTPPP LPPSCQALLD EHVL

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	274	0.99