YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	lcl\|NC_016856.1_...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAFTLRFIK NKRYFAILAG ALVIIAGLTS QHAWSGNGLP QINGKALAAL AKQHPVVVLF  60
   61 RHAERCDRSD NTCLSDSTGI TVKGAQDARA LGKAFSADIQ NYNLYSSNTV RTIQSATWFS 120
  121 AGRSLTVDKK MMDCGSGIYA SINTLLKKSQ NKNIVIFTHN HCLTYIAKNK RGVKFDPDYL 180
  181 NALVMHAENG KLFLDGEFVP G

Type	Start	End	Confidence
Signal Peptide	1	35	0.92
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	201	0.99