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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16420092, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVSRRQFFK ICAGGMAGTT VAALGFTPKM ALAQARNYKL LRAKEIRNSC TYCSVGCGLL  60
   61 MYSLGDGAKN AKEAIYHIEG DPDHPVSRGA LCPKGAGLLD YVHSEDRLRY PEYRAPGSDK 120
  121 WQRISWDDAF TRIAKLMKAD RDANFIEKNE QGVTVNRWLS TGMLCASAAS NETGMLTQKF 180
  181 ARSLGMLAVD NQARVUHGPT VASLAPTFGR GAMTNHWVDI KNANVVMVMG GNAAEAHPVG 240
  241 FRWAMEAKNN NDATLIVVDP RFTRTASVAD IYAPIRSGTD ITFLSGVLLY LIENNKINAE 300
  301 YVKHYTNASL LVRDDFAFDD GLFSGYDAQK RQYDKSSWNY QFDENGYAKR DETLTHPRCV 360
  361 WNLLKQHVSR YTPDVVENIC GTPKADFLKV CEVLASTSVP DRTTTFLYAL GWTQHTVGAQ 420
  421 NIRTMAMIQL LLGNMGMAGG GVNALRGHSN IQGLTDLGLL STSLPGYLTL PSEKQADLQT 480
  481 YLAANTPKAT LADQVNYWGN YPKFFVSLMK SFYGDAAQQE NDWGFAWLPK WDQSYDVIKY 540
  541 FNMMDSGKVT GYFCQGFNPV ASFPDKNKVV QSLSKLKYLV VIDPLVTETS TFWQNHGESN 600
  601 DVDPTTIQTE VFRLPSTCFA EEDGSIANSG RWLQWHWKGQ DAPGEARNDG EILAGIYHRL 660
  661 REMYRAEGGK GAEPLLKMSW NYKQPDEPHS EEVAKENNGY ALEDLYDANG TLLARKGQLL 720
  721 SSFALLRDDG TTSSSCWIYT GSWTEQGNQM SRRDNADPSG LGNTLGWAWA WPLNRRVLYN 780
  781 RASADPQGKP WDPKRMLIQW NGAKWTGNDI PDFNNAAPGS GTNPFIMQPE GLGRLFAIDK 840
  841 MAEGPFPEHY EPMETPLGTN PLHPNVVSNP AARLYEEDAL RMGKKEQFPY VGTTYRLTEH 900
  901 FHTWTKHALL NAIAQPEQFV EISETLAAAK GIANGDYVKV SSKRGFIRAV AVVTRRLRTL 960
  961 HVNGQQVETV GIPIHWGFEG VARKGYIANT LTPNVGDANS QTPEYKAFLV NIEKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle