YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LPOB_SALTY
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKMHRYAAI AALAIFLSGC MAQRQPAPVE EVKPAPEQPA QPPQPPVVPS VPTIPQQPGP  60
   61 IEHEDQTGQP APKVRHYDWN GAMQPLVSKM LQADGVTAGS VLLVDSVNNR TNGSLNANEA 120
  121 TETLRNALAN NGKFTLVSVQ QLSMAKQQLG LSPQDSLGTR SKAIGIARNV GAQYVLYSSA 180
  181 SGNVNAPALQ MQLMLVQTGE IIWSGKGAVQ QQ

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	212	0.99