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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16419152, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRQNSFRDY TAESALFVRR ALVAFLGILL LTGVLIANLY NLQILRFTDY QTRSNENRIK  60
   61 LVPIAPSRGI IYDRNGIPLA LNRTIYQIEM MPEKVDNVQQ TLDALRSVVD LNDDDIAAFK 120
  121 KERARSHRFT SIPVKTNLTE VQVARFAVNQ YRFPGVEVKG YKRRYYPYGS ALTHVIGYVS 180
  181 KINDKDVERL DRENKLANYA ATHDIGKLGI ERYYEDILHG QTGYEEVEVN NRGRVIRQLK 240
  241 EVPPQAGHDI YLTLDLKLQQ YIETLLAGSR AAVIVTDPRT GGVLSLVSMP SYDPNLFVDG 300
  301 ISSKDYSGLL NDPNTPLVNR ATQGVYPPAS TVKPYVAVSA LSAGVITRNT SLFDPGWWQL 360
  361 PGSEKRYRDW KKWGHGHLNI TKSLEESADT FFYQVAYDMG IDRLSEWMGK FGYGHYTGID 420
  421 LAEERSGNMP TREWKQKRFK KPWYQGDTIP VGIGQGYWTA TPIQMSKALM ILINDGVVKV 480
  481 PHLLMSTAEN GKQVPWVQPH EPPVGDIHSG YWEIAKDGMY GVANRPNGTA HKYFASAPYK 540
  541 IAAKSGTAQV FGLKANETYN AHKIAERLRD HKLMTAFAPY NNPQVAVAII LENGGAGPAV 600
  601 GTIMRQILDH IMLGDNNTHL PAENPVVAAA EDQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle