YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16419118, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKRTLLLAM LPILAHAEEL PAPVKAIEKQ GITILKSFEA PGGMKGYLGK YQDMGVTIYL  60
   61 TPDGKHAISG YMYNEKGENL SNALIEKEIY APAGREMWQK MEKASWILDG KKDAPVVLYV 120
  121 FADPFCPYCK QFWQQARPWV ESGKVQLRTL LVGVIKPESP ATAAAILAAK DPAKTWHDYE 180
  181 ASAGKMKLEV PASIPPAQMK VINQNQQLMD DLGANATPAI YYMNKDKILQ QVVGLPEKAQ 240
  241 LDAMMGQP

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	248	0.99