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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|205331528, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGNDREPIG RKGKPSRPVK QKVSRRRQHD DDYDDDYEDE EPMPRKGKGK GRKPRGKRGW  60
   61 LWLLLKLFIV FVVLFAIYGV YLDQKIRSRI DGKVWQLPAA VYGRMVNLEP DMPVSKNEMV 120
  121 KLLEATQYRL VTKMTRPGEF TVQANSIEMI RRPFDFPDSK EGQVRARLTF SDGRLETIVN 180
  181 LDNNRQFGFF RLDPRLITML SSPNGEQRLF VPRSGFPDLL VDTLLATEDR HFYEHDGISL 240
  241 YSIGRAVLAN LTAGRTVQGA STLTQQLVKN LFLSSERSYW RKANEAYMAL IMDARYSKDR 300
  301 ILELYMNEVY LGQSGDNEIR GFPLASLYYF GRPVEELSLD QQALLVGMVK GASIYNPWRN 360
  361 PKLALERRNL VLRLLQQQKI IDQELYDMLS ARPLGVQPRG GVISPQPAFM QMVRQELQAK 420
  421 LGDKIKDLSG VKIFTTFDSV AQDAAEKAVV EGIPALKKQR KLSDLETAMV VVDRFSGEVR 480
  481 AMVGGAEPQY AGYNRAMQAR RSIGSLAKPA TYLTALSQPN LYRLNTWIAD APISLRQPNG 540
  541 QVWSPQNDDR RYSESGKVML VDALTRSMNV PTVNLGMALG LPAVTDTWTK LGVPKDQLNP 600
  601 VPAMLLGALN LTPIEVAQAF QTIASGGNRA PLSALRSVIA EDGKVLYQSY PQAERAVPAQ 660
  661 AAYLTLWTMQ QVVQRGTGRQ LGAKYPGLHL AGKTGTTNNN VDTWFAGIDG SQVTITWVGR 720
  721 DNNQPTKLYG ASGAMAIYQR YLANQTPTPL VLTPPEDVVD MGVDYDGNFV CSGGMRTLPV 780
  781 WTDDPNTLCQ QGEMMQQQQQ PSGNPFDQSS QPQQPAQQQP PKEEKSDGVA GWIKEMFGGN 840
  841 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle