YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53854820
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPPVWSFIF ATLGAFIFHS GEVQGQCWES SRCTDLTSED GILDCIKACK TDLTAESPVF  60
   61 PGNGHMQPLS ENIRKYVMSH FRWNKFGRRN STGSDGSSAG YKREDIANYP IFNLFPATES 120
  121 QDNQDSNLEE DALDRQGNKR SYSMEHFRWG KPVGRKRRPI KVYPNGMEEE SSESYPMDLR 180
  181 RELSFGSFDY PEIDSNEDLE DNEVLGVPSK KNGNYRMHHF RWGSPPKDKR YGGFMTSERS 240
  241 QTPLMTLFKN AIIKNAHKKA Q

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	261	0.99