YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41582654, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNRRNRLLS NGLFYIIVFV ILLAGINWAV GGSGSNGSTE NIRYSQLVKD LKAGKVKSIN  60
   61 VQPSNGVYTV TGSYKKAQKS NNQNNNGFGL IPSSQSSNEV TRFSTTMLQN DSMVKTISDL 120
  121 AQKSGASISG QGESQSGTWI STIVMLVPTL IFIVMLWMMM NQGGQGRGGG MMNFGKSHVK 180
  181 PQDPSKNKVR FSDVAGEEEE KQELVEIVEF LKSPAKYTKL GARIPAGVLL EGPPGTGKTL 240
  241 LARAVAGEAG VPFYSISGSD FVEMFVGVGA SRVRDLFETA KKNAPSIIFI DEIDAVGRKR 300
  301 GNGVSGGHDE REQTLNQLLV EMDGFEGDEG VIVMAATNRS DVLDPALLRP GRFDRKVLVG 360
  361 RPDVKGREAI LKVHAKNKPL APDVDLKKVA RQTPGFVGAD LENVLNEAAL VAARRNKTEI 420
  421 TASDIDEAED RVIAGPAKKD TVISPEERKR VAYHEAGHAI VGLVLSDSRT VRKVTIVPRG 480
  481 RAGGYNIMLP KEDENIITKK QLMEQVAGLM GGRAGEEVVV GDKSTGASND FEQATNIARG 540
  541 MVTQYGMTDV GMTELESPSM QSPYGTKPYS EATAAKIDEA VKEILDEGHK QAVDIIKSHR 600
  601 ETHKIIAEAL LKYETLNEKQ ILSLFKTGKM PENDENEFPS ESKASTYEEA KAAMEKKDQQ 660
  661 REETENKDDK EDIHPLPDDH KNIDNIPLNP PSEKNESDDH SSDENKDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle