YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89271994, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSCTRQLL ARCMSSSTAA AKKLAIKHVT VIGGGLMGAG IAQVAASTGH TVVLVDQTDD  60
   61 ILKKSRKTIE DSLKRVTKKM FADKPEAASQ FIEKILANFT TSTDPAAVVH STDLVVEAIV 120
  121 ENLDVKNELF KRLDKFAPEH TIFASNTSSL PITDIANSTT RQDRFGGLHF FNPVPMMKLI 180
  181 EVIKTPMTSQ TTFESLMDFS KALGKTPVSC KDTPGFIVNR LLVPYLMESV RLYERGHASK 240
  241 EDIDVAMKLG AGYPMGPFEL LDYVGLDTSK YIIDGWHALE PNNPLFAPSE LLDKLVAEKK 300
  301 LGKKTGEGFY KYK

Type	Start	End	Confidence
Signal Peptide	1	21	0.81
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	313	0.97