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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ubc-17
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQASQRSS STSAVAQKTR ERRKSKSRRR CWFGCLWLSS RVSLIRSSSR FSRSPEPDES  60
   61 LTAIDKVMSI INEKPLKMAH ILKTARYNPR FLPKINNHFY RRFVNDVSFS ERKQFVECGV 120
  121 IHHLLELIGE TAISDFSASS RSADEQKRRA RRNSSASLSH KGTGYGTGST RSRWDIERTV 180
  181 EEKLIREEHL TWLLSILNSF MLGWPTTDNL KTKPEELVHM TEIAIKLIAD SSVLSILEYN 240
  241 LRNDSFFDAL LETAASMAAT PGLVPFLVRP YTSSAKSIAK ELIPRFKENI LSIQARWGGT 300
  301 LEETNFRMAE FTAKVTLLSD YVINAARAYE QTLPPEQRIQ TATHRRPSHS GLHSKMQGPK 360
  361 DDETIYKNKM QELQLQTAKF IGDFGKLCVP YVFRKEAKNI NPFSPHLRDR TKRIAKELAS 420
  421 IANALPLNAS NSIYVCYDEG RVDIIKVLIS GPDDTPYANG LFEFDIFFPT GYPFSPPKCA 480
  481 FLTTGSGNVR FNPNLYNDGK ICLSILGTWE GRPEEKWNPY CSLMQVLVSI QEVIEKHLWL 540
  541 KREAILKQAQ AWIDNVSNDF GDDKMSKRKD VFAFETGFNP ATQERVIHNL IQELQAMQSP 600
  601 FAKEEAEESE RLKREQSEKE EKQKKEAAAL AEIEREKREL ELDFQRRRSS VLATHVAVIR 660
  661 TQPTGDYSVP SVNEPSTSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle