YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE37681
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFTFTRFLF VYFLVGVRSV SGSIISRREV PTVSTPPPQQ STLLPNFPWL ENIPKFEFTT  60
   61 SKPKKPNAIR EGLIEQVRSG KIPKELAPFV NLTKIDEMKK EHQDTLDFII RDEDVADVPD 120
  121 DDVEHRKVNT LTHDGNKTII TISDEARDDL YKHWVDQSLA GLMGAVVTNV INKRKMTKSE 180
  181 KKDHYICINE SKNVTAHAKC VVVVLDQRNK RNEKLKMYST LATKLNSHRK RTRADNDIYK 240
  241 TRLDHYDKYV KSGAEEYRVK RAAGFSIFDE MENKRQAAIR SNVQTRKSYT IRENKSLSPL 300
  301 ALIARKLTEL VRAGKNKQEP PKRWQQVIQE IKDESFRIKG KKNNKERMKR KFSKFVSTMK 360
  361 EAGLNPRKAL NTMGMEDLFE DDPILSEKEM DLKDRKEMEE RMSPDDKIMH EPIKLIREAI 420
  421 KIGMAMAGKN GSEIGDKKVA LLSPQFMSIL PDEVANDTVS LFSPSILSLH GEGTDLERSL 480
  481 SLTKALRLME DTGQEEWMNF VLEASGVTET VEKMRIAEEK EQDEERRKDF VDKDGRPMYF 540
  541 TKENVTEIYG EYEATKIDLI NGIYKTMSKD QLDALNSTGY SIMDDKQLDM LYGPGSPYNN 600
  601 SEALDKFRGI PLESMPDRIE QDIRLLAREE MKFELSRKKD IVLNPLVLSS VVNDPVTASQ 660
  661 SLILSPILIV PIIFSPSIYG NVILSPWIFV PVLVSPRILG AVILSPVIMS PAILTPLCMV 720
  721 PIILSPGVGL PFILSPFILS PFILSPVVMA PLVLSPFALS PFIGIPNALT PLILSPFVLS 780
  781 PLVLSPPFVS AFVLNPYALS PAVLSNGAVF TAVLSPNTNS SSDIQKSVLR LKHQLTEGTI 840
  841 PSKLLPFLNL TAVEKEKASH NGSLQFIVDD DYKKGISKDP PVLNINEMTH DGNKTIVKIS 900
  901 EEATYQLIQK WVDQAASGFM MALMSTKLKD KRLEPRHIAQ HNNCTQVAKS ITEHAQCVVT 960
  961 ILKRLDDQRR KIRKFKKLKF RRSQLRRARA KRDLPETYRE DKERVVQQKQ QYELKGKKEM1020
 1021 TSPFSLIAKT LTDIVRENKN KEKEPKKKWQ TVINEIKDEL NRIKQKKKDQ EDFRNVFSKY1080
 1081 SRTMKMLGLN PETAFRRAGL DSIGEEISAA NTTGKLSEEE QVLKKPLMMI RDGVKLGMML1140
 1141 TGQNVSNFDD RKIALMSPQF MSVLPDEQAN DTVNLLSPSV FALHESGSEL DQMLSLSRAM1200
 1201 RFLSENGHDD WMNFVLEASG VTEAVEKMRF DERKQEMEAF RKHFSNENGQ PMYFTRQNVS1260
 1261 EMYGDYKTSK IDSMEKLHKS MSAAQMHEMN STGYAIMSSQ QISEFYGPGS PYNDSHAYEN1320
 1321 YRNLRRNDIP DILENNIHQM AREEQAFKVA RQVGRELMRT THYKNFQISR KM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle