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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|53830059
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPPSKRLSE VEAATFHRKP MGGKYGVLVG DALLTAYCQK ARISHSTPSQ SYENAHGHQN  60
   61 FRPKSGTRFR TSGQEGGTRD LEGQKKAGRR SWDSALEGGS QEELGGGGHQ GWDPGLAATT 120
  121 GPRAHIGGGA LALCPESSGV REDGGPGLGV REPIFVGLRG RRQSARNSRG PPEQPNEELG 180
  181 IEHGVQPLGS RERETGQGPG SVLYWRPEVS SCGRTGPLQR GSLSPGALSS GVPGSGNSSP 240
  241 LPSDFLIRHH GPKPVSSQRN AGTGSRKRVG TARCCGELWA TGSKGQGERA TTSGAERTAP 300
  301 RRNCLPGASG SGPELDSAPR TARTAPASGS APRESRTAPE PAPKRMRSRG LFRCRFLPQR 360
  361 PGPRPPGLPA RPEARKVTSA NRARFRRAAN RHPQFPQYNY QTLVPENEAA GTAVLRVVAQ 420
  421 DPDAGEAGRL VYSLAALMNS RSLELFSIDP QSGLIRTAAA LDRESMERHY LRVTAQDHGS 480
  481 PRLSATTMVA VTVADRNDHS PVFEQAQYRE TLRENVEEGY PILQLRATDG DAPPNANLRY 540
  541 RFVGPPAARA AAAAAFEIDP RSGLISTSGR VDREHMESYE LVVEASDQGQ EPGPRSATVR 600
  601 VHITVLDEND NAPQFSEKRY VAQVREDVRP HTVVLRVTAT DRDKDANGLV HYNIISGNSR 660
  661 GHFAIDSLTG EIQVVAPLDF EAEREYALRI RAQDAGRPPL SNNTGLASIQ VVDINDHIPI 720
  721 FVSTPFQVSV LENAPLGHSV IHIQAVDADH GENARLEYSL TGVAPDTPFV INSATGWVSV 780
  781 SGPLDRESVE HYFFGVEARD HGSPPLSASA SVTVTVLDVN DNRPEFTMKE YHLRLNEDAA 840
  841 VGTSVVSVTA VDRDANSAIS YQITGGNTRN RFAISTQGGV GLVTLALPLD YKQERYFKLV 900
  901 LTASDRALHD HCYVHINITD ANTHRPVFQS AHYSVSVNED RPMGSTIVVI SASDDDVGEN 960
  961 ARITYLLEDN LPQFRIDADS GAITLQAPLD YEDQVTYTLA ITARDNGIPQ KADTTYVEVM1020
 1021 VNDVNDNAPQ FVASHYTGLV SEDAPPFTSV LQISATDRDA HANGRVQYTF QNGEDGDGDF1080
 1081 TIEPTSGIVR TVRRLDREAV SVYELTAYAV DRGVPPLRTP VSIQVMVQDV NDNAPVFPAE1140
 1141 EFEVRVKENS IVGSVVAQIT AVDPDEGPNA HIMYQIVEGN IPELFQMDIF SGELTALIDL1200
 1201 DYEARQEYVI VVQATSAPLV SRATVHVRLV DQNDNSPVLN NFQILFNNYV SNRSDTFPSG1260
 1261 IIGRIPAYDP DVSDHLFYSF ERGNELQLLV VNQTSGELRL SRKLDNNRPL VASMLVTVTD1320
 1321 GLHSVTAQCV LRVVIITEEL LANSLTVRLE NMWQERFLSP LLGRFLEGVA AVLATPAEDV1380
 1381 FIFNIQNDTD VGGTVLNVSF SALAPRGAGA GAAGPWFSSE ELQEQLYVRR AALAARSLLD1440
 1441 VLPFDDNVCL REPCENYMKC VSVLRFDSSA PFLASASTLF RPIQPIAGLR CRCPPGFTGD1500
 1501 FCETELDLCY SNPCRNGGAC ARREGGYTCV CRPRFTGEDC ELDTEAGRCV PGVCRNGGTC1560
 1561 TDAPNGGFRC QCPAGGAFEG PRCEVAARSF PPSSFVMFRG LRQRFHLTLS LSFATVQQSG1620
 1621 LLFYNGRLNE KHDFLALELV AGQVRLTYST GESNTVVSPT VPGGLSDGQW HTVHLRYYNK1680
 1681 PRTDALGGAQ GPSKDKVAVL SVDDCDVAVA LQFGAEIGNY SCAAAGVQTS SKKSLDLTGP1740
 1741 LLLGGVPNLP ENFPVSHKDF IGCMRDLHID GRRVDMAAFV ANNGTMAGCQ AKLHFCDSGP1800
 1801 CKNSGFCSER WGSFSCDCPV GFGGKDCQLT MAHPHHFRGN GTLSWNFGSD MAVSVPWYLG1860
 1861 LAFRTRATQG VLMQVQAGPH STLLCQLDRG LLSVTVTRGS GRASHLLLDQ VTVSDGRWHD1920
 1921 LRLELQEEPG GRRGHHVLMV SLDFSLFQDT MAVGSELQGL KVKQLHVGGL PPGSAEEAPQ1980
 1981 GLVGCIQGVW LGSTPSGSPA LLPPSHRVNA EPGCVVTNAC ASGPCPPHAD CRDLWQTFSC2040
 2041 TCQPGYYGPG CVDACLLNPC QNQGSCRHLP GAPHGYTCDC VGGYFGHHCE HRMDQQCPRG2100
 2101 WWGSPTCGPC NCDVHKGFDP NCNKTNGQCH CKEFHYRPRG SDSCLPCDCY PVGSTSRSCA2160
 2161 PHSGQCPCRP GALGRQCNSC DSPFAEVTAS GCRVLYDACP KSLRSGVWWP QTKFGVLATV2220
 2221 PCPRGALGAA VRLCDEAQGW LEPDLFNCTS PAFRELSLLL DGLELNKTAL DTMEAKKLAQ2280
 2281 RLREVTGHTD HYFSQDVRVT ARLLAHLLAF ESHQQGFGLT ATQDAHFNEN LLWAGSALLA2340
 2341 PETGDLWAAL GQRAPGGSPG SAGLVRHLEE YAATLARNME LTYLNPMGLV TPNIMLSIDR2400
 2401 MEHPSSPRGA RRYPRYHSNL FRGQDAWDPH THVLLPSQSP RPSPSEVLPT SSSIENSTTS2460
 2461 SVVPPPAPPE PEPGISIIIL LVYRTLGGLL PAQFQAERRG ARLPQNPVMN SPVVSVAVFH2520
 2521 GRNFLRGILE SPISLEFRLL QTANRSKAIC VQWDPPGLAE QHGVWTARDC ELVHRNGSHA2580
 2581 RCRCSRTGTF GVLMDASPRE RLEGDLELLA VFTHVVVAVS VAALVLTAAI LLSLRSLKSN2640
 2641 VRGIHANVAA ALGVAELLFL LGIHRTHNQV QDQGQGTCVL MTLLAQEAWG QNSGSELVCT2700
 2701 AVAILLHYFF LSTFAWLFVQ GLHLYRMQVE PRNVDRGAMR FYHALGWGVP AVLLGLAVGL2760
 2761 DPEGYGNPDF CWISVHEPLI WSFAGPVVLV IVMNGTMFLL AARTSCSTGQ REAKKTSALR2820
 2821 TLRSSFLLLL LVSASWLFGL LAVNHSILAF HYLHAGLCGL QGLAVLLLFC VLNADARAAW2880
 2881 MPACLGRKAA PEEARPAPGL GPGAYNNTAL FEESGLIRIT LGASTVSSVS SARSGRTQDQ2940
 2941 DSQRGRSYLR DNVLVRHGSA ADHTDHSLQA HAGPTDLDVA MFHRDAGADS DSDSDLSLEE3000
 3001 ERSLSIPSSE SEDNGRTRGR FQRPLCRAAQ SERLLTHPKD VDGNDLLSYW PALGECEAAP3060
 3061 CALQTWGSER RLGLDTSKDA ANNNQPDPAL TSGDETSLGR AQRQRKGILK NRLQYPLVPQ3120
 3121 TRGAPELSWC RAATLGHRAV PAASYGRIYA GGGTGSLSQP ASRYSSREQL DLLLRRQLSR3180
 3181 ERLEEAPAPV LRPLSRPGSQ ECMDAAPGRL EPKDRGSTLP RRQPPRDYPG AMAGRFGSRD3240
 3241 ALDLGAPREW LSTLPPPRRT RDLDPQPPPL PLSPQRQLSR DPLLPSRPLD SLSRSSNSRE3300
 3301 QLDQVPSRHP SREALGPLPQ LLRAREDSVS GPSHGPSTEQ LDILSSILAS FNSSALSSVQ3360
 3361 SSSTPLGPHT TATPSATASV LGPSTPRSAT SHSISELSPD SEPRDTQALL SATQAMDLRR3420
 3421 RDYHMERPLL NQEHLEELGR WGSAPRTHQW RTWLQCSRAR AYALLLQHLP VLVWLPRYPV3480
 3481 RDWLLGDLLS GLSVAIMQLP QGLAYALLAG LPPVFGLYSS FYPVFIYFLF GTSRHISVES3540
 3541 LCVPGPVDTG TFAVMSVMVG SVTESLAPQA LNDSMINETA RDAARVQVAS TLSVLVGLFQ3600
 3601 VGLGLIHFGF VVTYLSEPLV RGYTTAAAVQ VFVSQLKYVF GLHLSSHSGP LSLIYTVLEV3660
 3661 CWKLPQSKVG TVVTAAVAGV VLVVVKLLND KLQQQLPMPI PGELLTLIGA TGISYGMGLK3720
 3721 HRFEVDVVGN IPAGLVPPVA PNTQLFSKLV GSAFTIAVVG FAIAISLGKI FALRHGYRVD3780
 3781 SNQELVALGL SNLIGGIFQC FPVSCSMSRS LVQESTGGNS QVAGAISSLF ILLIIVKLGE3840
 3841 LFHDLPKAVL AAIIIVNLKG MLRQLSDMRS LWKANRADLL IWLVTFTATI LLNLDLGLVV3900
 3901 AVIFSLLLVV VRTQMPHYSV LGQVPDTDIY RDVAEYSEAK EVRGVKVFRS SATVYFANAE3960
 3961 FYSDALKQRC GVDVDFLISQ KKKLLKKQEQ LKLKQLQKEE KLRKQAGPLL SACLAPQQVS4020
 4021 SGDKMEDATA NGQEDSKAPD GSTLKALGLP QPDFHSLILD LGALSFVDTV CLKSLKNIFH4080
 4081 DFREIEVEVY MAACHSPVVS QLEAGHFFDA SITKKHLFAS VHDAVTFALQ HPRPVPDSPV4140
 4141 SPSLAVSSDV KQLEPELLLR NNLLSGIPEK VQGSVGANGQ SLEDTE

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