YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215765938, gi...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAADWMWARR SWEKWAGKHV GASGKPVKAA LLLNYDPTGP SRLLPVVAEQ EGTELKAVDL  60
   61 LPFLDFVRRN NLQMEFFSIG SNRYLVTSIH EHWFCARCVN AVQPEGEGVI VMEIGAYLLV 120
  121 CMMVLLVLLH KQWWLLISLH GTLIEELTNC

Type	Start	End	Confidence
Cytoplasmic	1	108	0.72
Transmembrane Helix	109	134	0.75
Non-Cytoplasmic	135	150	0.72