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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP45_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPLQWLTIS FALIIFHSLT VSSSVLSHSD RVTRLPGQPR VGFQQYSGYV TVDDKKQRAL  60
   61 FYYFAEAETN PSSKPLVLWL NGGPGCSSLG VGAFSENGPF RPKGPILVKN QHSWNQEANM 120
  121 LYLETPVGVG FSYSTQSSHY EGVNDKITAR DNLVFLQRWF LKFPHYLNRS LFITGESYAG 180
  181 HYVPQLAELM IQYNKKHHLF NLRGIAIGNP VLEFATDFNS RAEYFWSHGL ISDSTYKMFT 240
  241 SYCNYSRYVS EYYRGSMSSM CSKVMSQVST ETSRFVDKYD VTLDVCIPSV LSQSKVVSPN 300
  301 QVGESVDVCV EDETVNYLNR RDVQEALHAR LIGVREWTVC SNVLDYQLLD VEIPTINIVG 360
  361 SLVKAGVPVL VYSGDQDSVI PLTGSRTLVS RLAKQLGLRT SVPYRVWFAG QQVGGWTQVY 420
  421 GNVLSFATVR GASHEVPFSQ PERSLVLFKA FLDGHPLPEE F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle