YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19698446
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSFGVLFV VGVWMMMGSG SYAQLSTNFY SKSCPKVLST VELVVETAVS KEQRLGASLL  60
   61 RLFFHDCFVN GCDGSVLLDD TSSFTGEQTA TPNNGSLRGF EVVDEIKAKV EKVCPGVVSC 120
  121 ADILAIAARD SVVILGGPDW DVKLGRRDSK TASFSDANSG VLPLGSANLS QLISLFQAQG 180
  181 LSTKDMVALS GAHTIGKARC LVFRNRIYND TIIDTSFAKT RRSSCPRTRG SGDNNLAPLD 240
  241 LATPNSFDSK YFENLLNKKG LLHSDQELFN GGSTDSLVKT YSSNVKKFYS DFIAAMIKMG 300
  301 DIKPLTGSNG EIRKNCGKPN

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	320	0.99