YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31296635
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIKSEYKPR MLPKEEQVKK PMTSNGRISF VLMAIAVLFA GLIARGLYLQ TVTYNFLKEQ  60
   61 GDNRIVRTQT LPATRGTVSD RNGAVLALSA PTESLFAVPK EMKEMPSAAQ LERLSELVDV 120
  121 PVDVLRNKLE QKGKSFIWIK RQLDPKVAEE VKALGLENFV FEKELKRHYP MGNLFAHVIG 180
  181 FTDIDGKGQE GLELSLEDSL HGEDGAEVVL RDRQGNIVDS LDSPRNKAPK NGKDIILSLD 240
  241 QRIQTLAYEE LNKAVEYHQA KAGTVVVLDA RTGEILALAN TPAYDPNRPG RADSEQRRNR 300
  301 AVTDMIEPGS AIKPFVIAKA LDAGKTDLNE RLNTQPYKIG PSPVRDDTHV YPSLDVRGIM 360
  361 QKSSNVGTSK LSARFGAEEM YDFYHELGIG VRMHSGFPGE TAGLLRNWRR WRPIEQATMS 420
  421 FGYGLQLSLL QLARAYTALT HDGVLLPLSF EKQAVAPQGK RIFKESTARE VRNLMVSVTE 480
  481 PGGTGTAGAV DGFDVGAKTG TARKLVNGRY VDNKHVGTFI GFAPAKNPRV IVAVTIDEPT 540
  541 ANGYYGGVVA GPPFKKIMGG SLNILGVSPT KPLTNVAAVK TPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle