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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83320107, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIIPLPQLL ALLCCCGLAA ATQGPTDPST PPNLGLAHFH NLTFDPGTWT LSWACGGHDG  60
   61 AVMSCTVIDQ EAGIRRRVRS RGCRCRFQPM ELHRGVDLEV AGDKGHAQVH QTLRFENEGA 120
  121 PGSGAENLTC EILAAHFLCC YWAVGPAAPD DIRYSLRVLN ATGHEVASCS AAPGTPPTRC 180
  181 QADDLTHLPR LAYIVVTGQS RTGLVRFLDA VVNTKGIERL GPPDNVSASC NFSHCTITWA 240
  241 PPPTWAPMTE QDFRFEIEWK KAEPSSIAQK VVIAGREDNA FAFPSPAPRG RLWVRVRAGD 300
  301 TRSDRWSDWS PALELGSEAT TPPRALVLAA SSCAALLCAL ALGAACRRLA LSRRLLPPIP 360
  361 GIRDRVSDDE RVNSETLRKD LLRP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle