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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SIAT2_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSLKQWRR LALGLILVWA LLFLALLSYF MESRVDDPHA AAALSYTDTR RLTSLQGNPR  60
   61 TIMATHLGLA TSSAPSTSSN TQQEQSQEEN PSADPQPSPL SQEAYPYPDP QSLAAWSAFG 120
  121 TQDVGSRSTG VSRNRERQEY NQDSPQEDED EEEEVIGGEE EDEEGGDEGR GRTTKRVARH 180
  181 GSSDPHEYYV PRYKSIVHGL WKGSLSMGML SPRLQRAMKD YLNNNKHGVA YRGHRKAKQS 240
  241 RQQVLCELKK REKIRTLDGA EMPFSKLGWQ KIVPALPLSQ IHRPGLKTCA VVTSAGAMLH 300
  301 SGLGKEIDSH DAVLRFNTAP TVGYERDVGN KTTIRIINSQ ILANPMHRFN RSSLYKNVTL 360
  361 VAWDPAPYTL NLHQWYSNPD YNLFTPYMEY RMRFPSQPFY ILHPKYIWQL WDVIQANNLE 420
  421 NIQPNPPSSG FIGILLMMSL CEEVHVYEYI PSLRQTDLCH YHERYYDAAC TLGAYHPLLY 480
  481 EKMLIQRMNI GSEDELKRKG KVTLPGFNKV HCEP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle