YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|215678836, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWLPRLLSH AAAAGRATAR TTGSHARGSN GFASGRGGSD GAVVPREWLR KLWTEELRRQ  60
   61 RDAARRWGRR AVATTDGGGA DSFSDFARAP SRSYQHDDRD LTPVEAKLKP LLSRANLLIA 120
  121 RDIEWANIVL AFEQESRYII MDPLFPQSPV GFIREKSNVI FRQLFRSRRP FVAEITDAMG 180
  181 NEIFTVRRPF WLINSSIYAE VNGKEVGVVH RRWHLWRRIY DLYLGNRQFA VVENPGFWNW 240
  241 TFTLTDEDDN VLAQIDRNWR GIGFELFTDA GQYAIRFGDA GLNRKFGLAS DIDELHVVRQ 300
  301 LSLPERAVAL ALAVSLDCDY FSKRGGWGLP FLIATE

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	336	0.99