YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DGAT2_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLIAAYSG VLRGTGSSIL SALQDLFSVT WLNRAKVEKQ LQVISVLQWV LSFLVLGVAC  60
   61 SVILMYTFCT DCWLIAVLYF TWLVFDWNTP KKGGRRSQWV RNWAVWRYFR DYFPIQLVKT 120
  121 HNLLTSRNYI FGYHPHGIMG LGAFCNFSTE ATEVSKKFPG IRPYLATLAG NFRMPVLREY 180
  181 LMSGGICPVN RDTIDYLLSK NGSGNAIIIV VGGAAESLSS MPGKNAVTLR NRKGFVKLAL 240
  241 RHGADLVPTY SFGENEVYKQ VIFEEGSWGR WVQKKFQKYI GFAPCIFHGR GLFSSDTWGL 300
  301 VPYSKPITTV VGEPITIPRL ERPTQQDIDL YHAMYVQALV KLFDQHKTKF GLPETEVLEV 360
  361 N

Type	Start	End	Confidence
Cytoplasmic	1	44	0.65
Transmembrane Helix	45	66	0.85
Non-Cytoplasmic	67	71	0.53
Transmembrane Helix	72	89	0.69
Cytoplasmic	90	361	0.68