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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1546839
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKAPPGLN RKTSRSTLSL PPEPVDIIRS KTCSRRVKIN VGGLNHEVLW RTLDRLPRTR  60
   61 LGKLRDCNTH ESLLEVCDDY NLNENEYFFD RHPGAFTSIL NFYRTGKLHM MEEMCALSFG 120
  121 QELDYWGIDE IYLESCCQAR YHQKKEQMNE ELRREAETMR DGEGEEFDNT CCPDKRKKLW 180
  181 DLLEKPNSSV AAKILAIVSI LFIVLSTIAL SLNTLPELQE TDEFGQLNDN RQLAHVEAVC 240
  241 IAWFTMEYLL RFLSSPNKWK FFKGPLNVID LLAILPYYVT IFLTESNKSV LQFQNVRRVV 300
  301 QIFRIMRILR ILKLARHSTG LQSLGFTLRR SYNELGLLIL FLAMGIMIFS SLVFFAEKDE 360
  361 DATKFTSIPA SFWWATITMT TVGYGDIYPK TLLGKIVGGL CCIAGVLVIA LPIPIIVNNF 420
  421 SEFYKEQKRQ EKAIKRREAL ERAKRNGSIV SMNLKDAFAR SMELIDVAVE KAGESANTKD 480
  481 SADDNHLSPS RWKWARKALS ETSSNKSFEN KYQEVSQKDS HEQLNNTFSS SPQHLSAQKL 540
  541 EMLYNEITKT QPHSHPNPDC QEKPERPSAY EEEIEMEEVV CPQEQLAVAQ TEVIVDMKST 600
  601 SSIDSFTSCA TDFTETERSP LPPPSASHLQ MKFPTDLPGT EEHQRARGPP FLTLSREKGP 660
  661 AARDGTLEYA PVDITVNLDA SGSQCGLHSP LQSDNATDSP KSSLKGSNPL KSRSLKVNFK 720
  721 ENRGSAPQTP PSTARPLPVT TADFSLTTPQ HISTILLEET PSQGDRPCWA LRFQRLVRDL 780
  781 PKGCPPGFPS RNCSLSLQER GGASLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle