YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40796041
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLAINLIL TVIWGAISAS FTLANLLLGF AVGALSLWLI RRELQPVTYP IRPLRLALLL  60
   61 ALFFKELAVS ATKVAILVTR KKMALKPGIF AYPLTLRSDF EISLLANLIT LTPGTLSVDV 120
  121 SEDRKTLYVH ALDCADPGAL RQDISRGFER RIREAFER

Type	Start	End	Confidence
Cytoplasmic	1	9	0.70
Transmembrane Helix	10	35	0.78
Non-Cytoplasmic	36	55	0.74
Transmembrane Helix	56	77	0.63
Cytoplasmic	78	158	0.69