YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15290740
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSVCIIGAG TAGLCCARHS IANGFETTVF ELSDRIGGTW VYNEATGVVN GIDVHSSMYK  60
   61 NLRTNLPKEV MGFPDFEIGA NEASYVRSDE ICDFLNQYAN HFDLKKHIKF DSYVIRVLQR 120
  121 KTKWQVLFKD LVTNKIEFQY FDKVLVANGH YHTPNYSQIP NMERFKGQFL HSHDFRSREV 180
  181 FEGKSVLVIG AGPSGMDLSN IISRTADRVT ISHHLTDIGQ HSFFENVQQK PDVRELDEKG 240
  241 AFFVDGSYQE FDTVFFCTGY KYAFPFLTVD SGIYVEDNYV QELYKQCINI RNPSMALIGL 300
  301 PFYVCAAQMM DIQARFIMSY YNGSNELPST EDMLKDTRDR MGKLWAEGLR KRHAHMLGPK 360
  361 QIDYFTDLSQ TAGVKNIKPV MTKLHNESSK CFNENLLHFR EDNFAILDDE TFIKLN

Type	Start	End	Confidence
Signal Peptide	1	22	0.85
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	416	0.99