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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|162459990, gi...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGDPAAGVG GNAHPASGSK SSRSSTRHRQ FRDRAKVRVD DLQEMFCGLQ SARKESRSAD  60
   61 AAVLEEQVHQ MLREWRAELS VPSPASSLQN SQGNNREASD PPSDTLRLLQ LAVPEEEDDA 120
  121 SSKLLVPPSR QTHEHGQDSR MANTDQQCEA IDGGTAPAQH SLGQGVDGDC GEVSSVANAM 180
  181 FNHRMYYTDY ELNIDDFLCG DGYEINISGS NEDQFNNLHG IGQLGHQQFD LPLDLPPTHS 240
  241 YADANNSEQN TGDVFVHMSD LLTTIWPSPS QYLGPKCALW DCGRPAGGTE DSGDYCNPYH 300
  301 AGLALNDDGL LGIRPVMRPR GIDLKDGPLF AALIAKVQGK NVGIPVCGGA ATSKSPWNAP 360
  361 ELFDLSLLEG ESLREWLFFD TPRRAFESGN RKQRSLPDYG GRGWHESRKL VMKDFAGLKR 420
  421 SYYMDPQPSS SHEWHLFEYE INASDALALY RLEYKSSDPK RVLLSQNWLV HRMKSGSEWA 480
  481 GRLQTALWKT SGLLGASQRL TRTRRIPMQI PVHMLTLPIK LMLQMLIRQR SRSTKWHFSM 540
  541 ETLFMDLTFH ILKASSMDLI FHILKTLSTD LIFHILKTSS MDLTFHRDTQ PKEAASFGTQ 600
  601 VTGLEDAGSI MCLLMHCMAL IKQKPLTSST KLGLSSLALH ISKFQMVGFC TGAWQVGVFE 660
  661 FGNAEVYLHK LCIISPVSKL PIWMEISLLY QQPVAAWVCW IGVLSSLSRF YSRPFHFMCL 720
  721 FIREKPVKLD WIY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle