YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58865886, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEASLLLLP EAAAERDARE KLSLWDRRPD SIAPLTDRQT DSVLELKAAV ENLPVPAELP  60
   61 IEDVCSLASQ SLPIELTAVV PESTEDVLLK GFTSLGMEEE RIETAQQFFS WFAKLQTQMD 120
  121 QDEGTKYRQM RDYLSGFQEQ CDAILSDVNS ALQHLESLQK QYLFVSNKTG TLHEACEQLL 180
  181 KEQSELADLA EHIQQKLSYF NELETINTKL NSPTLSVNSE GFIPMLAKLD DCITYISSHP 240
  241 NFKDYPVYLL KFKQCLSKAL HLMKTYTVNT LQTLTNQLLK RDPSSVPNAD NAFTLFYVKF 300
  301 RAAAPKVRTL IEQIEQRSEK IPEYQHLLND IHQCYLDQRE LLLGPSIAYT VTELTSQNNR 360
  361 DHCALVRSGC AFMVHVCQDE HQLYNEFFTK PTSKLDELLE KLCVSLYDVF RPLIIHVIHL 420
  421 ETLSELCGIL KNEVLEDHVQ NNAEQLGAFA AGVKQMLEDV QERLVYRTHI YIQTDITGYK 480
  481 PAPGDLAYPD KLVMMEQIAQ SLKDEQKKTP SEASFSDVRL EEGESSSLRK SGSTDSLNPR 540
  541 PQTTISPADL HGMWYPTVRR TLVCLSKLYR CIDRAVFQGL SQEALSACIQ SLLGASESIS 600
  601 KNKTQIDGQL FLIKHLLILR EQIAPFHTEF TIKEISLDLK KTRDAAFKIL NPMTVPRFFR 660
  661 LNSNNALIEF LLEGTPEIRE HYLDSKKDVD RHLKSACEQF IQQQTRLFVE PLEEFMTKVS 720
  721 ALKTMASQGG PKYTLSQQPW AQPAKVNDLV ATAYKTIKTK LPQTLRSMSL YLSNKDTEFI 780
  781 LFKPVRNNIQ QVFQKFHALL KEEFSPEDIQ IIACPSVEQL NLLLSVSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle