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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|58865628, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIGSGFLSG GGGPGSSGGS GSSGSSGSGG SRRAEMEPTF PQSMVMFNHR LPPVTSFTRP  60
   61 AGTAAPPPQC VLSSSTSAAP AAEPPPPPAP DMTFKKEPAA SAAAFPSQRT SWGFLQSLVS 120
  121 IKQEKPADPE EQQSHHHHHH HHYGGLFAGA EERSPGLGGG EGGSHGVIQD LSILHQHVQQ 180
  181 QPAQHHRDVL LSSSGSRTDD HGNEEPKQDT NVKKAKRPKP ESQGIKAKRK PSASSKPLVG 240
  241 EGEGAVLSPS QKPHICDHCS AAFRSSYHLR RHVLIHTGER PFQCSQCSMG FIQKYLLQRH 300
  301 EKIHSREKPF GCDQCSMKFI QKYHMERHKR THSGEKPYKC DTCQQYFSRT DRLLKHRRTC 360
  361 GEAIAKGAAS AEPGSSNHNN MGNLAVLSQG NTSSSRRKSK SKSIAVENKE HKTGKTNESQ 420
  421 MSNNINMQSY SVEMPTVSTS GGIIGTGLDE LQKRVPKLIF KKGSRKNTDK SYLNFVSPLP 480
  481 DVAGQKSLSG KPSGSLGIVS NNSVETISLL QSASGKPGPI SSNYDDAMQF SKKRRYLPTA 540
  541 SSNSAFSINV GHMVSQQSVI QSAGVSVLDN EAPLSLIDSS ALNAEIKSCH DKSGIPDEVL 600
  601 QSILDQYSSK SEPQKEDPFN LTEPRVDLHT SGEHSELVQE EHLSPGTQTP SNDKASVLQE 660
  661 YSKYLQQAFE KSTNAGFTLG HGFQFVSLSS PLHNHTLFPE KQIYTTSPLE CGFGQSVTSV 720
  721 LPSSLPKPPF GMLFGSQPGL YLSALDATHQ QLTPSQELDD LIDSQKNLET SSAFQSSSQK 780
  781 LTSQKEQQKN LESSTSFQIP SQELASQIDP QKDIEPRTTY QIENFAQAFG SQFKSGSRVP 840
  841 MTFITNSNGE VDHRVRTSVS DFSGYTNMMS DVSEPCSTRV KTPTSQSYR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle