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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OSMR_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.68
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSVVLHQV TFLLAVLSLR TSQSKVLGEP LQLTPEIHTV SLQSALQEAN LEWTVPTFSH  60
   61 QELNIVFQIE ISRMRTSNTI WVGNYSTTVK HEETVHWKWT SDIPLECATH FIRIRAMVDD 120
  121 AQYPPQSSWS NWSSWKEVNA QVSVPPDTLL IFPEDRLLEE GSNVTICLMI GQNLYNVSCK 180
  181 LQEEPIRGEQ LDSHLSLIKL NNVVFLNNAG TNINCKAMNG TKNTFGTVLF VSKVLEEPKN 240
  241 FSCETRDFKT LNCLWEPGID TTLSWHKQRS QHYTLYESFS GRREVSNHRN SHTWQITEDS 300
  301 QETYNFTLTA ENNLRKRSVS ISFNLTHRVH PKAPHDVTLK TVGATKAHMT WKVPSRGDYT 360
  361 LLCQVELQCE GEVIHEHNVS VHTSANYLFS DLEPDTEYKA CVRCASANHF WKWSDWMQKK 420
  421 FRTPEAAPSE ALDVWRDVRT ENGRHVVTLF WKPLLKSQAN GKIISYNIVV ENEANPTESE 480
  481 QYSVRAPALG TNLSLDLHPY KIHISANNSA GASPESLVVL SSHSGHEEVH EKTIKGIKNG 540
  541 FNISWEPVSG DAIGYVVDWC AHSQTQRCDL QWKNVGPNIT STIITSDAFE PGVRYNFRIF 600
  601 ERSVEENVRL VEKQRGYTQE LAPSVNPGVT IHNLTPNSFS LKWQDYASDF QSGFIKGYLV 660
  661 YLKSKELQCN PNWERTVLSD KSVLCKYDVD DPETKTLTVE NLRPESLYEF LVTPYTSAGQ 720
  721 GPNETYTKVT TPDVRSHMLL QIILPMTLGV FLSIIVCYWK SQWVKEKCYP DIPNPYKSSI 780
  781 LSLIKSKKNP HLIMNVKDCI PDVLEVINKA EGSKTQCVGS GKLHTEDVPT KPPLVPTEKD 840
  841 SSGPMPFVFL ENFTYDQSAF DSGSHGFIPG PLKNTPHQLG LLAPPNKLQN VLENDYMKSL 900
  901 VESPTEETSL IYVSQLASPI CGDKDSLVTN PPMPVHGSEY KKQMALPGSL TSASLKENNL 960
  961 TS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle