YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57238015, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSDRIYLS LYYILKFFVT FMPECILHFL ALIVARITFY LNKKHRKIID TNLQICFPQY  60
   61 TQKERDKLSL KIYENFAQFG IDCLQNQNTT KEKILNKVNF INENLLIDAL ALKRPIIFTT 120
  121 AHYGNWEILS LAYAAKYGAI AIVGKKLKSE IMYEILSQSR TQFDIELIDK KGGIRQMLSA 180
  181 LKKGRTLGIL TDQDCAENES VRLKFFNKEV NYQMGASLIA QRSNALIIPV YAYKEDGKFC 240
  241 IEFFKAKDSQ NASLEELTLY QAQSCEEMIK KRPWEYFFFH RRFASYNKEI YKDAK

Type	Start	End	Confidence
Cytoplasmic	1	11	0.55
Transmembrane Helix	12	35	0.78
Non-Cytoplasmic	36	295	0.64