YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|61651686, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYFLQSGSF LSLCFPNCFL DSSDAEQLRK SKEIDREIFK EKTFVKRLVK ILLLGAGESG  60
   61 KSTFLKQMRI IHGDDFDKGD KEEFRGTIYS NVMKGVRVLV DAREKLHIPW GNPSNQTHAD 120
  121 IMMAFDTRST MVSQGMLETK LFLQYLPSIR ALWADIGIQH AYDRRREFQL GESVKYFLDN 180
  181 LDKLGAPDYL PTQQDILLAR KPTKGIHEYD FEIKNVPFKM VDVGGQRSER RRWFECFESV 240
  241 TSILFLVSSS EYDQVLMEDR QTNRLMESLN IFETIVNNRV FNNVSIILFL NKTDLLEEKV 300
  301 KSVSIQDYFP EFTDDPWCLG DVKNLLVECF RNKRRDQQQK PLYHHFTTAI NTENIRLVFR 360
  361 DVKDTILHDN LKQLMLQ

Type	Start	End	Confidence
Signal Peptide	1	20	0.84
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	377	0.99