YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37780051
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANNQLYHV SLALFFCLGL LAIQVTSRTL QDDSIFERHE QWMTHYGKVY KNPQEREKRL  60
   61 RIFTENLKYI EASNNAGNKK PYKLGINQFA DLTNEEFIAS RNKFKGHMCS SIIRTTTFKY 120
  121 ENTSVPSTVD WRKKGAVTPV KNQGQCGCCW AFSAIAATEG IHKISTGKLV SLSEQELVDC 180
  181 DTNGVDQGCE GGLMDDAFKF IIQNNGISTE AGYPYQGVDG TCKANEASTS AATITGYEDV 240
  241 PANNENALQK AVANQPISVA IDASGSDFQF YKSGVFTGSC GTELDHGVTA VGYGISNDGT 300
  301 KYWLVKNSWG TDWGEEGYIR MQRSIDAAEG LCGIAMQASY PTA

Type	Start	End	Confidence
Signal Peptide	1	27	0.93
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	343	0.99