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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|52789417
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSARIIWL ILWTVCVAED CKGPPPRENS EILSGSWSEQ LYSEGTQATY KCRPGYRTLG  60
   61 TIVKVCKNGE WVPSNPSRIC RKRPCGHPGD TPFGSFRLAV GSEFEFGAKV VYTCDEGYQL 120
  121 LGEIDYRECD ADGWTNDIPI CEVVKCLPVT ELENGRIVSG AAEPDQEYYF GQVVRFECNS 180
  181 GFKIEGQKEM HCSENGLWSN EKPQCVEISC LPPRVENGDG IYLKPVYKEN ERFQYKCKQG 240
  241 FVYKERGDAV CTGSGWNPQP SCEEMTCLTP YIPNGIYTPH RIKHRIDDEI RYECKNGFYP 300
  301 ATRSPVSKCT ITGWIPAPRC SLKPCDFPQF KHGRLYYEES RRPYFPVPIG KEYSYYCDNG 360
  361 FTTPSQSYWD YLRCTVNGWE PEVPCLRQCI FHYVEYGESL YWQRRYIEGQ SAKVQCHSGY 420
  421 SLPNGQDTIL CTENGWSPPP KCVRIKTDCD NLPTFEIAKP TEKKKKSYRS GEQVTFRCPP 480
  481 PYRMDGSDIV TCVNTKWIGQ PVCKDNSCVN PPHVPNATIL TRHKTKYPSG DKVRYDCNKP 540
  541 FELFGEVEVM CQNGIWTEPP KCKDSTGKCG PPPPIDNGDI TSLSLPVYAP LSSVEYQCQN 600
  601 YYLLKGNKIV TCRNGKWSQP PTCLHACVIP EDIMEKHNIV LRWRENAKIY SQSGENIEFM 660
  661 CKPGYRKFRG SPPFRTKCIE GHINYPTCV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle