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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LG3BP_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALLWLLSVF LLVPGTQGAK DGDMRLVNGA SASEGRVEIF YRGRWGTVCD NLWNLLDAHV  60
   61 VCRALGYENA TQALSRAAFG PGKGPIMLDE VECTGNESSL ANCSSLGWMV SHCGHEKDAG 120
  121 VVCSNDSRGI HILDLSGELP DALGQIFDSQ QDCDLFIQVT GQGHGDLSLC AHTLILRTNP 180
  181 EAQALWQVVG SSVIMRVDAE CMPVVRDFLR YFYSRRIEVS MSSVKCLHKL ASAYGATELQ 240
  241 GYCGRLFVTL LPQDPTFHTP LELYEYAQAT GDSVLEDLCV QFLAWNFEPL TQAEAWLSVP 300
  301 NALIQALLPK SELAVSSELD LLKAVDQWST ATGASHGDVE RLVEQIRFPM MLPQELFELQ 360
  361 FNLSLYQGHQ ALFQRKTMEA LEFHTVPLKV LAKYRSLNLT EDVYKPRLYT SSTWSSLLMA 420
  421 GAWSTQSYKY RQFYTYNYGS QSRYSSYQNF QTPQHPSFLF KDKLISWSAT YLPTIQSCWN 480
  481 YGFSCTSDEL PVLGLTTSSY SDPTIGYENK ALILCGGYSV VDVTTFIGSK APIPGTQETN 540
  541 SSKTPSLFPC ASGAFSSFRV VIRPFYLTNS TDTE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle