YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31158517
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKRKTLIIG FFGIALGLCI GTMLKNYLAL EIVKRCSLRP TNLKTPADII GLRDEDTIQN  60
   61 SQRNLVFVGV MTAKSFLEGR ARAVYDTWGK EVPGRMAFFS SEGSYSDDLP VVGLKNVDDR 120
  121 YPPQKKSFMM LYYMYEHYID RFEWFIRADD DVYMEPDKLE RFLRSIDSSK PQFIGQAGKG 180
  181 NSEEFGLLSL EFDENFCMGG PGVILSSETL RRVAPHIPSC LKNLYSTHED VEVGRCVQKF 240
  241 AGIPCTWNYE MQYILRHNSS GRNAYTGKLK RKEIHNAITL HPIKQAPLMY RLHSYVQGLK 300
  301 AEEMRQESLL LHRDIKRMAK YLEVPDESTY MLPSVSPESD STKRHFQDHN ILGISPELNK 360
  361 FVPASTDDLL DWSFIARSLY SASSANPKQK IDSAMREGLE DAITEVMENI NNYSRQRGRV 420
  421 IEFRELLYGY HRLDALHGQD MILDLLLIYK KYRGKKMTVP VRRHLYVQRA FTGIFVKEVD 480
  481 EDFYNVTLQQ SLLGSLFQNG MARLSSHFTM PSGLLSPTQD KIVFVLPIAG RLGTFERFLR 540
  541 TYERVCVRGE QHCDLLVVIF GSPDELGDHL QLLHDLHARH VYQQVNWIQR SSAFSRGVAL 600
  601 DVAARSSYIR QEDIILFIDV DMVFEVETLQ RVRMHTQRGK QVYLPIVFSQ YDPQRRSGDA 660
  661 GGSEDEGETP RIDDERGYFR QFGFGICAIY KSDILDEDIN GFDKDITGWG LEDVKFLEKI 720
  721 VRVGTRQRGF LANTAELAMD YNEAAEQWRR LSVFRAPDPT LVHIYHDISC DVQLDAPQYN 780
  781 MCLGTKANSL GSTRLMEQLF HSSPENVQFA ADFNRQKQQQ QQQQQAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle