YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|31096349
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQAMASSMA GCLRGCSSQT VLEGSLQFSG PNRLSLLHGN TNNVNKVTTR SSVTVRAQQQ  60
   61 ESSRRAVIGL VATGLVSSSF VQAVLAEAIP IKVGGPPPLS GGLPGTLNSD EARDLKLPLK 120
  121 ERFFIQPLAP TEAAARTKES AKEIVAAKKF IDQKAWPFLQ NDLRLRAGYL RYDLKTIISS 180
  181 KPKDQKQSLK ELTDKLFQDI SNLDHAAKIK SPSEAEKYYA IAVSTLNDVL SKIA

Type	Start	End	Confidence
Signal Peptide	1	18	0.91
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	234	0.98