YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|31074969
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSNYISATV SSILLFLLCS SSLFGASMAA LVQEQPLVLK YHNGALLKGT VTVNLIWYGK  60
   61 FTPIQRSIIV DFLQSLNSPK APNPSAASWW KTTEKYKTGA STVTLGKQIL DENCSLGKSL 120
  121 KNSHIVYLAS KGGYMGRSVN LVLTAKDVFV EGFCSRCGSH GSTRGKVRFT YAWVGNSETQ 180
  181 CAGQCAWPFH QPIYGPQTPP LLAPNGDVGV DGMIINVATV LAGTVTNPFN NGYFQGPATA 240
  241 PLEAVSACTG MFGSGSYPGY PGQTLVDKST GASYNAHGVN GRRFLLPAMW DPTKSACSAL 300
  301 V

Type	Start	End	Confidence
Signal Peptide	1	29	0.98
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	301	0.99