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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NDT2_ARATH
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEHGNSTFD YRSIREVAAN AGAGATAGAI AATFVCPLDV IKTRLQVLGL PEAPASGQRG  60
   61 GVIITSLKNI IKEEGYRGMY RGLSPTIIAL LPNWAVYFSV YGKLKDVLQS SDGKLSIGSN 120
  121 MIAAAGAGAA TSIATNPLWV VKTRLMTQGI RPGVVPYKSV MSAFSRICHE EGVRGLYSGI 180
  181 LPSLAGVSHV AIQFPAYEKI KQYMAKMDNT SVENLSPGNV AIASSIAKVI ASILTYPHEV 240
  241 IRAKLQEQGQ IRNAETKYSG VIDCITKVFR SEGIPGLYRG CATNLLRTTP SAVITFTTYE 300
  301 MMLRFFRQVV PPETNRSDDR RREEERKNLV SRRGEEEDKD LGLRESQTQS NKISTPHIPL 360
  361 GSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle