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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OCP3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKAMALSSA GVVSHLHPPS FSSSSGLSVN RVLFRNRNAS PCGLSLPILN PSRSVLVFAR  60
   61 GKNRKGFVSS SSSSPKKNKK KSLDGADNGG GEEEEDPFEA LFNLLEEDLK NDNSDDEEIS 120
  121 EEELEALADE LARALGVGDD VDDIDLFGSV TGDVDVDVDN DDDDNDDDDN DDDDDDSEED 180
  181 ERPTKLKNWQ LKRLAYALKA GRRKTSIKNL AAEVCLDRAY VLELLRDPPP KLLMLSATLP 240
  241 DEKPPVAAPE NSSPDPSPVE SLSAEDVVVE PKEKVKDEAV HVMQQRWSAQ KRVKKAHIET 300
  301 LEKVYRRSKR PTNAVVSSIV QVTNLPRKRV LKWFEDKRAE DGVPDKRAPY QAPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle