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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30909317
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSVGALLA CAVLGLCLAV PEKTVRWCAV SDHEANKCVA FRDNMKKVLP ADGLRMACVK  60
   61 KTSYLDCIKA IAANEADAVT LDAGLVYEAG LTPNNLKPVA AEFYGTLENP QTFYYAVAVV 120
  121 KKGSGFQLNQ LRGKKSCHTG LGRSAGWNIP IGLLYCDLPE PRKPLEKAVA SFFSGSCVPC 180
  181 ADGVAFPQLC QLCPGCGCSS AQPYFGYSGA FKCLKDDAGE VAFVKHLTIF ENLEQKADRD 240
  241 QYELLCTDNT RKPVDEYESC YLARVPSHAV VARTVDGKED LIWELLNQAQ EHFGKGKSGD 300
  301 FQLFSSPHGK NLLFKDSALG FLRVPPKMDF RLYLGYKYVT AVRNLREGIC PESPVDECKT 360
  361 VKWCALSHHE RLKCDEWSIN SGGKIACESA ESTEDCIAKI MNGEADAMSL DGGYVYIAGQ 420
  421 CGLMPVMAEN YESANCQSLE EGYYAVAVVK KSNADITWNS LKGKKSCHTA VDRTAGWNIP 480
  481 MGLLYSRINH CRFDEFFSQG CAPGYEKNSS LCELCIGPSV CASNNKETYY GYTGAFRCLV 540
  541 EKGDVAFVKH QTVLQNTGGK NPDEWAKNLK EEDFELLCPD GTRKPVSEAE NCHLARAPNH 600
  601 AVVSRKDKAA CVREVLRSQV TEFGSHVSDC SNKFCLFSSE TKDLLFRDDT KCLVRLTDDT 660
  661 TYEKYLGAEY VTAVGNLRKC STSRLLEACT FHKY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle