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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30840147
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSYGLPSENG GLQHRPRKDL GPRHNAHPTQ IYGHHKEQYS YQAQDRGIPK KTDSSSTVDS  60
   61 LDEDHYSKCQ DCVHRLGRVL RRKLGEDWIF LVLLGLLMAL VSRCMDYVSA KSLQAYKWTY 120
  121 AQMQPSLPLQ YLAWVTFPLI LILFSALFCQ LISPQAVGSG IPEMKTILRG VVLKEYLTLK 180
  181 AFVAKVVALT AGLGSGIPVG KEGPFVHIAS ICAAVLSKFM SMFSGVYEQP YYYTDILTVG 240
  241 CAVGVGCCFG TPLGGVLFSI EVTSTYFAVR NYWRGFFAAT FSAFVFRVLA VWNKDAVTIT 300
  301 ALFRTNFRMD FPFDLKELPA FAVIGICCGF LGAVFVYLHR QVMLGVRKHK ALSQFLAKHR 360
  361 LLYPGIVTFV IASLTFPPGM GQFMAGELMP REAISTLFDN NTWVKHIGDP KSLGQSAVWI 420
  421 HPQVNVVIII LLFFVMKFWM SIVATTMPIP CGGFMPVFVL GAAFGRLVGE IMAMLFPEGI 480
  481 LFDDIIYKIL PGGYAVIGAA ALTGAVSHTV STAVICFELT GQIAHILPMM VAVILANMVA 540
  541 QSLQPSLYDS IIQVKKLPYL PDLGWNQLSK FTIFVEDIMV RDVKFVSASC TYGELRNLLQ 600
  601 TTTVKTLPLV DSKDSMILLG SVERSELQSL LQRHLCAERR LKAAQDMARK LSELPYNGQA 660
  661 QLAGEWHPGG RPESFAFVDE DEDEDVSRKT ELPQTPTPPP PPPPPLPPQF PIAPSYPEEP 720
  721 NGPLPSHKQP PEASDSADQR SSIFQRLLHC LLGKAHSTKK KITQDSTDLV DNMSPEEIEA 780
  781 WEREQLSQPV CFDFCCIDQS PFQLVEQTTL HKTHTLFSLL GLHLAYVTSM GKLRGVLALE 840
  841 ELQKAIKGHT KSGVQLRPPL ASFRNTTSIR KTPGGPPPPA ESWNVPEGED GAPEREVMVP 900
  901 TMPETPVPPP SPEVPSCLAP ARVEGELEEL EMVGNLGPEE DLADILHGPS LRSTDEEDED 960
  961 ELIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle