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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30840145
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSYGLPSENG GLQHRPRKDL GPRHNAHPTQ IYGHHKEQYS YQAQDRGIPK KTDSSSTVDS  60
   61 LDEDHYSKCQ DCVHRLGRVL RRKLGEDWIF LVLLGLLMAL VSRCMDYVSA KSLQAYKWTY 120
  121 AQMQPSLPLQ YLAWVTFPLI LILFSALFCQ LISPQAVGSG IPEMKTILRG VVLKEYLTLK 180
  181 AFVAKVVALT AGLGSGIPVG KEGPFVHIAS ICAAVLSKFM SMFSGVYEQP YYYTDILTVG 240
  241 CAVGVGCCFG TPLGVTITAL FRTNFRMDFP FDLKELPAFA VIGICCGFLG AVFVYLHRQV 300
  301 MLGVRKHKAL SQFLAKHRLL YPGIVTFVIA SLTFPPGMGQ FMAGELMPRE AISTLFDNNT 360
  361 WVKHIGDPKS LGQSAVWIHP QVNVVIIILL FFVMKFWMSI VATTMPIPCG GFMPVFVLGA 420
  421 AFGRLVGEIM AMLFPEGILF DDIIYKILPG GYAVIGAAAL TGAVSHTVST AVICFELTGQ 480
  481 IAHILPMMVA VILANMVAQS LQPSLYDSII QVKKLPYLPD LGWNQLSKFT IFVEDIMVRD 540
  541 VKFVSASCTY GELRNLLQTT TVKTLPLVDS KDSMILLGSV ERSELQSLLQ RHLCAERRLK 600
  601 AAQDMARKLS ELPYNGQAQL AGEWHPGGRP ESFAFVDEDE DEDVSRKTEL PQTPTPPPPP 660
  661 PPPLPPQFPI APSYPEEPNG PLPSHKQPPE ASDSADQRSS IFQRLLHCLL GKAHSTKKKI 720
  721 TQDSTDLVDN MSPEEIEAWE REQLSQPVCF DFCCIDQSPF QLVEQTTLHK THTLFSLLGL 780
  781 HLAYVTSMGK LRGVLALEEL QKAIKGHTKS GVQLRPPLAS FRNTTSIRKT PGGPPPPAES 840
  841 WNVPEGEDGA PEREVMVPTM PETPVPPPSP EVPSCLAPAR VEGELEELEM VGNLGPEEDL 900
  901 ADILHGPSLR STDEEDEDEL IL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle