YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58378673, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACATLKRSL DWESLNQRPT KRRRCHPFGS PSQTASASSS SASPSGSSST SVAAAAAAAS  60
   61 MRVMEPKPSP FAEATCSKLT PEKMAQNITE EIKRLHRRKQ LTFNSHNFER MQDSESSGSE 120
  121 MGPDSPRRPD SPPSMVKNPE KALFTFKQVQ MICERMLKER EDALREQYDA VLTTKLAEQY 180
  181 DAFVKFTYDQ IQRRYEAAPS YLS

Type	Start	End	Confidence
Signal Peptide	1	54	0.68
N-region	1	45
H-region	46	51
C-region	52	54
Cleavage Site	54	55
Non-Cytoplasmic	55	203	0.99