YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55245599, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSGIQKNMAH LNLLQIGVLS LIAVGSVFAG NPCLKGPPVP KNAAECCVTP FLVEPSAFMT  60
   61 CHSKWIGQTK RQMAMEGIPR GCCVAECVMN STSLYSNGKI DREALTKLYL ASTKSMAPEW 120
  121 NKITLDAIDG CFKMADTIKD EIEAGAKLTP AFEGEQICHP ISGTILACMG MTLFAECPAK 180
  181 LFTVNDDCNK LKSYHSKCPF L

Type	Start	End	Confidence
Cytoplasmic	1	10	0.64
Transmembrane Helix	11	30	0.80
Non-Cytoplasmic	31	201	0.75