YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58378566, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KMLCTALGIV LGVLVGLYGL FELHYFLRMC LCVVSARFLK KRMHILDTGT VMGLCLTNDI  60
   61 DTLLYHMNNA RYLREIDFAR VDFYERTSLY RTIRSKGGSV VQGATTIRYR RFIRPFTRFT 120
  121 ISSRIVYWDN QSIFMEHRFL GGTDGFIHCI ALCRQRVMQC SVEDVMATLL KSGISLPSSS 180
  181 GAKKLPSNTT SSTEFLEKVE TGGVIEAPSL AKPDLPPEVA KWLEWNDISS ASLRSEC

Type	Start	End	Confidence
Cytoplasmic	1	6	0.37
Transmembrane Helix	7	27	0.73
Non-Cytoplasmic	28	237	0.63