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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MFP1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFLIGGSCF VPSVPLHSRF LSSPSSSSSS SPSSSQFGLL CSSNVAKFKR RRPTLASLNQ  60
   61 EDGYEYDVAS AKRRAFLLVG ISVLPFLQLR SPALADERGN EIKTSKVDLE TEVAVVSEGT 120
  121 SPNPFLALLN GLGIFSAGVL GALYALARQD TKAAEETIES LKNQLKDRER ALVLKEKDFE 180
  181 AKLQHEQEER KKEVEKAKEE QLSLINQLNS AKDLVTELGR ELSSEKKLCE KLKDQIESLE 240
  241 NSLSKAGEDK EALETKLREK LDLVEGLQDR INLLSLELKD SEEKAQRFNA SLAKKEAELK 300
  301 ELNSIYTQTS RDLAEAKLEI KQQKEELIRT QSELDSKNSA IEELNTRITT LVAEKESYIQ 360
  361 KLDSISKDYS ALKLTSETQA AADAELISRK EQEIQQLNEN LDRALDDVNK SKDKVADLTE 420
  421 KYEDSKRMLD IELTTVKNLR HELEGTKKTL QASRDRVSDL ETMLDESRAL CSKLESELAI 480
  481 VHEEWKEAKE RYERNLDAEK QKNEISASEL ALEKDLRRRV KDELEGVTHE LKESSVKNQS 540
  541 LQKELVEIYK KVETSNKELE EEKKTVLSLN KEVKGMEKQI LMEREARKSL ETDLEEAVKS 600
  601 LDEMNKNTSI LSRELEKVNT HASNLEDEKE VLQRSLGEAK NASKEAKENV EDAHILVMSL 660
  661 GKEREVLEKK VKKLEEDLGS AKGEILRMRS QPDSVKAVNS TDNKEKSDNT VTVKKVVRRR 720
  721 KSSTSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle