YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15222229, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKASTMQRK RWALMVLLFL SVSTVCMILV RSSFETCSIS SQFVEEKNGE SSAAKFQSNP  60
   61 LDFMKSKLVL LVSHELSLSG GPLLLMELAF LLRGVGADVV WITNQKPLED DEVVYSLEHK 120
  121 MLDRGVQVIS AKGQKAVDTS LKADLIVLNT AVAGKWLDAV LKENVVKVLP KILWWIHEMR 180
  181 GHYFNADLVK HLPFVAGAMI DSHATAGYWK NRTQARLGIK MPKTYVVHLG NSKELMEVAE 240
  241 DSVAKRVLRE HVRESLGVRN EDLLFGIINS VSRGKGQDLF LRAFHESLER IKEKKLQVPT 300
  301 MHAVVVGSDM SKQTKFETEL RNFVREKKLE NFVHFVNKTL TVAPYIAAID VLVQNSQARG 360
  361 ECFGRITIEA MAFKLPVLGT AAGGTMEIVV NGTTGLLHSA GKEGVIPLAK NIVKLATQVE 420
  421 LRLRMGKNGY ERVKEMFLEH HMSHRIASVL KEVLQHAKAR ALR

Type	Start	End	Confidence
Signal Peptide	1	32	0.78
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	463	0.99