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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110737176, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLKQSSAA VLVVGNTTPV LHTSRSTYRV GPFPVTRTQS FQSLTMANLQ KLPTSSSGKL  60
   61 NTASAVPCSS HDASPISENR ENKHVHGVSE KIVGVLGGGQ LGRMLCQAAS QLAIKVMILD 120
  121 PSKNCSASAL SYGHMVDSFD DSATVEEFAK RCGVLTVEIE HVDVDTLEKL EKQGVDCQPK 180
  181 ASTIRIIQDK YMQKVHFSQH GIPLPEFMEI SDIEGARKAG ELFGYPLMIK SKRLAYDGRG 240
  241 NAVANNQDEL SSAVTALGGF SRGLYIEKWA PFVKELAVIV ARGRDGSMVC YPVVETIHRD 300
  301 NICHIVKAPA DVPWKINKLA TDVAQKAVGS LEGAGVFAVE LFLTEDSQIL LNEVAPRPHN 360
  361 SGHQTIECCY TSQFEQHLRA VVGLPLGDPS MRTPASIMYN ILGEDDGEAG FKLAHRLIAR 420
  421 ALCIPGASVH WYDKPEMRKQ RKMGHITLVG QSMGILEQRL QCILSEQSHQ VHETPRVAII 480
  481 MGSDTDLPVM KDAAKILDLF GVTHEVKIVS AHRTPEMMYT YATSAHSRGV QVIIAGAGGA 540
  541 AHLPGMVASL TPLPVIGVPV RATRLDGVDS LLSIVQMPRG VPVATVAINN ATNAALLAVR 600
  601 MLGISDTDLV SRMRQYQEDM RDENLNKGEK LETEGWESYL NQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle